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Type the required information into the fields |
Description of field (click on description to get help) |
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Your email address [ watch typpos -:) ] |
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Password
(only for
commercial users) |
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Which type of prediction do you require? |
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Specify the format for the returned multiple-sequence alignment |
| PSI-BLAST
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Run iterated PSI-BLAST |
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| Output options |
| BLAST
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Return BLAST output from SWISS-PROT search |
| PHD msf
PHD rdb
PHD col
PHD casp
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Return additional PHD output |
| PROF msf
PROF rdb
PROF col
PROF casp
PROF only casp
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Return additional PROF output |
| TOPITS hssp
TOPITS strip
TOPITS own
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Additional TOPITS output |
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HTML formatted results
HTML for printouts
HTML with PHD graphs
HTML with PHD graphs for printouts
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Return result in HTML (for WWW browsers) |
| Results on FTP site, NOT in email (our current default)
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Results not sent to avoid email floods |
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keep full sequences
no PSI-BLAST
do NOT align
do NOT filter returned alignment
do NOT filter alignment used for PHD
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Process alignment |
NO prosite
NO prodom
NO seg
NO coils
NO cyspred
NO PredictNLS
NO PHD
NO PROF
NO ASP
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Switch off default methods
(e.g. to reduce output, or to save time) |
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One-line name of protein (not necessary) |
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Specify the format of your sequence(s), alignment, or prediction |
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Either choose a file with the respective information, or ... |
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Paste, or type your sequence
- amino acids in one-letter code
- any number of white spaces allowed
- non-standard amino acids to 'X'
- use SRS6
to get your sequence from a public database
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Batch or interactive? |
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Final action |
How long to wait (status of PP queue)?
WWW services for sequence analysis
